Browse of TCMCG006C08944 protein

CDS

Accession Number	TCMCG006C08944
gbkey	CDS
Protein Id	XP_022567696.1
Location	complement(join(4196330..4196530,4196620..4196826,4196904..4197076,4197174..4197378,4197457..4197584,4197675..4197762,4197853..4197996,4198109..4198252,4198353..4198496,4198574..4198693,4198793..4198895,4198991..4199067,4199162..4199332,4199415..4199491,4199589..4199757,4199844..4199988,4200093..4200304,4200372..4200428,4200430..4200591,4200664..4200757,4200864..4201015,4201115..4201310,4201418..4201482,4201566..4201635,4201789..4201881,4201976..4202046,4202135..4202254,4202379..4202456,4202633..4202697,4202782..4202854,4203132..4203185))
Gene	LOC106433858
GeneID	106433858
Organism	Brassica napus

Protein

Length	1285aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA293435
db_source	XM_022711975.1
Definition	LOW QUALITY PROTEIN: protein PIR-like [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category	S
Description	Cytoplasmic Fragile-X interacting family
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko03019        [VIEW IN KEGG]
KEGG_ko	ko:K05749        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko03013        [VIEW IN KEGG] ko04810        [VIEW IN KEGG] map03013        [VIEW IN KEGG] map04810        [VIEW IN KEGG]
GOs	GO:0000902        [VIEW IN EMBL-EBI] GO:0000904        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0006996        [VIEW IN EMBL-EBI] GO:0007010        [VIEW IN EMBL-EBI] GO:0007015        [VIEW IN EMBL-EBI] GO:0008064        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0009653        [VIEW IN EMBL-EBI] GO:0009888        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010026        [VIEW IN EMBL-EBI] GO:0010090        [VIEW IN EMBL-EBI] GO:0010638        [VIEW IN EMBL-EBI] GO:0016043        [VIEW IN EMBL-EBI] GO:0030029        [VIEW IN EMBL-EBI] GO:0030036        [VIEW IN EMBL-EBI] GO:0030154        [VIEW IN EMBL-EBI] GO:0030832        [VIEW IN EMBL-EBI] GO:0030833        [VIEW IN EMBL-EBI] GO:0030838        [VIEW IN EMBL-EBI] GO:0031209        [VIEW IN EMBL-EBI] GO:0031334        [VIEW IN EMBL-EBI] GO:0032271        [VIEW IN EMBL-EBI] GO:0032273        [VIEW IN EMBL-EBI] GO:0032502        [VIEW IN EMBL-EBI] GO:0032535        [VIEW IN EMBL-EBI] GO:0032956        [VIEW IN EMBL-EBI] GO:0032970        [VIEW IN EMBL-EBI] GO:0032989        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0033043        [VIEW IN EMBL-EBI] GO:0043254        [VIEW IN EMBL-EBI] GO:0044087        [VIEW IN EMBL-EBI] GO:0044089        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0045010        [VIEW IN EMBL-EBI] GO:0048468        [VIEW IN EMBL-EBI] GO:0048518        [VIEW IN EMBL-EBI] GO:0048522        [VIEW IN EMBL-EBI] GO:0048856        [VIEW IN EMBL-EBI] GO:0048869        [VIEW IN EMBL-EBI] GO:0050789        [VIEW IN EMBL-EBI] GO:0050794        [VIEW IN EMBL-EBI] GO:0051128        [VIEW IN EMBL-EBI] GO:0051130        [VIEW IN EMBL-EBI] GO:0051493        [VIEW IN EMBL-EBI] GO:0051495        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0065008        [VIEW IN EMBL-EBI] GO:0071840        [VIEW IN EMBL-EBI] GO:0090066        [VIEW IN EMBL-EBI] GO:0090558        [VIEW IN EMBL-EBI] GO:0090626        [VIEW IN EMBL-EBI] GO:0097435        [VIEW IN EMBL-EBI] GO:0110053        [VIEW IN EMBL-EBI] GO:1902903        [VIEW IN EMBL-EBI] GO:1902905        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGCGGTTCCTGTAGAGGAAGCAATCGCAGCTCTTTCCACTTTCTCCTTAGAGGATGAACAACCAGAAGTACAAGGACCGGCTGTGATGGTTTCAGCTGAAAGAGCTGCAACTGATAGTCCCATCGAGTATAGTGATGTTGCAGCATACCGGTTATCTCTTTCAGAAGACACAAAAGCTCTTAACCAGCTGAATACGCTTATACAAGAAGGAAAAGAGATGGCTTCAATTCTCTATACATATAGAAGCTGCGTCAAAGCACTGCCTCAGCTTCCCGAATCTATGAAGCATAGCCAGGCAGATTTGTATCTAGAGACATATCAAGTTTTGGACTTAGAAATGAGCCGTTTACGCGAAATTCAGAGATGGCAATCGTCGGCTTCAGCTAAACTAGCTGCTGATATGCAGAGGTTTTCAAGACCTGAAAGGCGAATCAATGGCCCCACAGTCACACATCTTTGGTCAATGCTGAAGTTGCTTGATGTCTTGGTTCAGCTTGACCATCTTAAAAATGCTAAAGCTAGCATTCCTAATGATTTCTCTTGGTATAAAAGAACATTCACTCAAGTCAGTGCACAGTGGCAAGATACGGATACCATGAGAGAAGAGTTAGATGACTTACAGATTTTCCTGAGCACAAGATGGGCTATTTTACTCAACTTGCATGTTGAGATGTTCCGTGTGAACAATGTGGAAGACATTCTCCAAGTACTCATAGTCTTCATTGTTGAGTCTCTGGAGTTGGATTTCGCACTCCTTTTTCCTGAGAGGTATATTCTTCTCCGAGTCTTGCCCGTTCTTGTTGTCTTAGCAACGCCATCAGAGAAAGATACCGAGGCTTTATACAAGAGGGTGAAACTCAACAGAATGATCAACATTTTCAAGAATGATCCTGTCATTCCTGCGTTTCCAGATCTCCATCTTTCTCCTGCTGCAATTTTGAAAGAACTGTCAGTATACTTTCAAAAGTTCTCATCACAGACTCGCCTTCTGACTCTTCCAGCACCTCATGAGCTCCCTCCACGTGAAGCTCTAGAATATCAGAGGCATTATTTGATAGTTAACCACATTGGAGCTCTCCGTGCTGAGCACGACGATTTCACAATCCGATTTGCTTCATCCATGAATCAGTTATTGCTGTTGAAGTCAAATGATGGAGCATACACTGAATGGTGCAGAGAGGTGAAAGGCAACATGTATGATATGGTTGTTGAAGGTTTCCAACTGCTTAGCAGATGGACTGCACGCATCTGGGAGCAATCTGCTTGGAAATTCTCTCGCCCGTGTAGGGATTGTAGGGATGCAGCAGAGACGCAAGAGGCCTCCGGGTCATATTCTGATTACGAGAAGGTGGTGAGGTACAATTACACTGCAGAAGAAAGGAGAGCCTTGGTAGAACTTGTTGGCTATATAAAGAGTGTAGGATCGATGCTTCAGCGCTGTGACACGTTAGTTGCAGATGCTTTATGGGAGACAATACATGCCGAAGTTCAAGATTTTGTACAAAACACGTTAGCCACGATGTTGCGTACCACCTTCCGAAAGAAGAAAGATCTCTCAAGGATTCTTTCTGATATGCGGACACTTTCAGCTGACTGGATGGCAAACACCAGGCCCGAACATGAGATGCCATCTTCACAACACGGAGGTGATGAGAGTAAAGCGAACTTCTTTTATCCGAGGCCAGTTGCCCCAACAGCAGCACAGGTGCACTGCTTGCAGTTTTTGATATATGAGGTTGTCTCTGGTGGTAATCTGAGGAGGCCAGGGGGATTCTTTGGAAATAATGGCTCTGAGATTCCTGTTAATGACCTAAAGCAACTGGAGACTTTCTTTTACAAGCTCAGCTTTTTTCTGCACATATTGGATTACTCAGCAAGTATTGGGATATTGACTGATCTGGGGTTCCTGTGGTTTAGAGAATTTTACCTGGAGTCTTCACGTGTTATTCAGTTCCCGATTGAGTGTTCACTACCATGGATGCTGATAGACCACATTCTCGAAGCCCCAAATTCAGGCCTTCTTGAGAGTGTTCTGCTGCCTTTTGACATTTATAATGACTCAGCTCAACAAGCACTGGTTGTGCTTAGGCAGAGGTTCCTCTATGATGAAATTGAGGCTGAGGTGGACCATGGTTTTGATATATTTGTATCAAGACTCTCGGAGTCTATATTCACATATTACAAGAGCTGGTCAGCAAGTGAGCTTCTTGATCCATCATTTCTCTTTGCCTTGGACAATGGTGAAAAGTTCTCCATCCAGCCTGTGAGGTTTACTGCGTTATTTAAGATGACAAAAGTAAAGATACTTGGTAGAACAATTAATTTAAGAAGTTTGATCGCTCAAAGGATGAACAAAACTTTTAGAGAGAATCTGGAGTTTCTCTTTGATCGTTTTGAGTCCCAGGACCTATGTGCTGTAGTGGAACTGGAGAAGCTCATAGATATCCTAAAGCACTCGCATGAACTGCTTTCACAAGATCTTACAATAGATCCTTTCAGCCTAATGCTGAATGAAATGCAAGAAAACATCTCTCTTGTCTCATTCTCCAGTCGACTTGCTACACAGATATGGTCAGAGATGCAGAGTGATTTCCTACCAAACTTCATACTTTGCAACACCACACAGAGATTTGTCCGCTCCTCGAAGGTTCCTCCTACTCAAAAACCATCAGTGCCTTCTGCTAAGCCTAGTTTCTACTGTGGCACTCAAGACTTAAATGCAGCACATCAAAGTTTTGCACGGTTGCATAGCGGATTTTTCGGTATACCACATCTGTTTTCCATAGTTAAACTTCTTGGATCCAGATCATTGCCTTGGCTTATAAGAGCGCTGCTGGATCATATATCAAATAAGATAACAACACTAGAGCCAATGATCTCTGGATTGCAAGAAGCATTGCCCAAGTCTATCGGATTGCTTTCTTTCGATGGTGGTGTTGCAGGCTGTATGAGGCTTATTAGAGAGCAACTAAACTGGGGAACAAAGGCAGAACTCAAAACAGAAGTTCTACGTGGAATAAAAGAAATTGGAAGTGTGATATATACAATGGGACTTCTCGACATTGTATTGAGAGAAGTAGACACAAAGCGTTTCATGCAGACAGCTCCATGGTTGGGTTTAATCCCAGGCGCAGAAGGACAGATAGTTAACGCTCAAGAAGGCGAAAGCCCACTTGTCAATCTCCTAAAGTCAGCGACTTCTGCTGTTGTGTCCAGTCCTGGTTGTCTTAATCCAGCAGCGTTCTACACCATGTCAAAACAAGCAGAAGCTGCAGATCTTTTGTACAAGGCAAACATGAACGGTGGAAGCGTTCTTGAATACACACTTGCATTCACAAGCGCTTCGCTTGACAAATACTGTAGTAAATGGAGTGCTCCTCCAAAGACGGGTTTTGTAGATATCACAACTTCAAAGGACTTTTACCGCATTTACGGTGGTCTTCAGATCGGGTATCTGGAGGAGATAACAGTTCCACAATCAGGTCAACAAGAAGTCCTCGGAGATTCTATAGCTTGGGGTGGTTGCACTATCATTTACCTGCTCGGACAGCAACTTCACTTTGAGCTGTTTGATTTCTCGTACCAAGTACTCAATGTCTCTGAGGTTGAAACTGTATCCGCTTCACATACTCATAGGAATCCTCAAGTTCTCCAGGGATGGGAAGGTTTGTTGGAGGGGATGAAGAAAGCTCGGCGGCTGAACAACCATGTCTTCTCAATGCTCAAAGCTCGTTGTCCACTCGAAGACAAGACGGCTTGTGCCATTAAACAGAGCGGCGCACCGTTACCACGTGTGAGATTTGAGAATACAGTTTCTGCCTTTGAGTCTCTACCTCAGAAAGGAACCGTTGGGTGA

Protein:   MAVPVEEAIAALSTFSLEDEQPEVQGPAVMVSAERAATDSPIEYSDVAAYRLSLSEDTKALNQLNTLIQEGKEMASILYTYRSCVKALPQLPESMKHSQADLYLETYQVLDLEMSRLREIQRWQSSASAKLAADMQRFSRPERRINGPTVTHLWSMLKLLDVLVQLDHLKNAKASIPNDFSWYKRTFTQVSAQWQDTDTMREELDDLQIFLSTRWAILLNLHVEMFRVNNVEDILQVLIVFIVESLELDFALLFPERYILLRVLPVLVVLATPSEKDTEALYKRVKLNRMINIFKNDPVIPAFPDLHLSPAAILKELSVYFQKFSSQTRLLTLPAPHELPPREALEYQRHYLIVNHIGALRAEHDDFTIRFASSMNQLLLLKSNDGAYTEWCREVKGNMYDMVVEGFQLLSRWTARIWEQSAWKFSRPCRDCRDAAETQEASGSYSDYEKVVRYNYTAEERRALVELVGYIKSVGSMLQRCDTLVADALWETIHAEVQDFVQNTLATMLRTTFRKKKDLSRILSDMRTLSADWMANTRPEHEMPSSQHGGDESKANFFYPRPVAPTAAQVHCLQFLIYEVVSGGNLRRPGGFFGNNGSEIPVNDLKQLETFFYKLSFFLHILDYSASIGILTDLGFLWFREFYLESSRVIQFPIECSLPWMLIDHILEAPNSGLLESVLLPFDIYNDSAQQALVVLRQRFLYDEIEAEVDHGFDIFVSRLSESIFTYYKSWSASELLDPSFLFALDNGEKFSIQPVRFTALFKMTKVKILGRTINLRSLIAQRMNKTFRENLEFLFDRFESQDLCAVVELEKLIDILKHSHELLSQDLTIDPFSLMLNEMQENISLVSFSSRLATQIWSEMQSDFLPNFILCNTTQRFVRSSKVPPTQKPSVPSAKPSFYCGTQDLNAAHQSFARLHSGFFGIPHLFSIVKLLGSRSLPWLIRALLDHISNKITTLEPMISGLQEALPKSIGLLSFDGGVAGCMRLIREQLNWGTKAELKTEVLRGIKEIGSVIYTMGLLDIVLREVDTKRFMQTAPWLGLIPGAEGQIVNAQEGESPLVNLLKSATSAVVSSPGCLNPAAFYTMSKQAEAADLLYKANMNGGSVLEYTLAFTSASLDKYCSKWSAPPKTGFVDITTSKDFYRIYGGLQIGYLEEITVPQSGQQEVLGDSIAWGGCTIIYLLGQQLHFELFDFSYQVLNVSEVETVSASHTHRNPQVLQGWEGLLEGMKKARRLNNHVFSMLKARCPLEDKTACAIKQSGAPLPRVRFENTVSAFESLPQKGTVG